Gene sequences

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Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015953589.1_cds_XP_016492674.1_82858
CDS Infomation	[gene=LOC107812152] [db_xref=GeneID:107812152] [protein=phytochrome A1] [protein_id=XP_016492674.1] [location=join(25246..27301,27503..28319,28455..28745,29251..29458)] [gbkey=CDS]
Sequence	ATGTCATCTTCAAGACCAAGCCAATCTTCCACCACTTCAGCAAGATCAAAGCATAGTGCT AGGATCATTGCACAGACCACTATAGATGCAAAGCTTCATGCAGATTTCGAGGAGTCGGGT GATTCCTTTGACTATTCAAGCTCAGTGAGGGTAACAAGTGTAGCTGGGGATGAGCGAAAG CCCAAGTCAGACAGAGTAACTACCGCTTACCTCAATCAGATCCAAAAGGGCAAGTTTATC CAGCCATTTGGCTGTTTGTTAGCCCTTGATGAGAAAACATTTAAGGTCATAGCATTCAGC GAGAATGCCCCCGAAATGCTGACCATGGTTAGCCATGCTGTTCCAAGTGTGGGTGAGCTT CCAGCTCTTGGCATTGGGACTGATATCAGAACGATCTTCACTGGTCCTAGTGCAGCTGCA TTGCAGAAGGCCTTGGGGTTCCGAGAGGTTTCTCTGTTAAATCCGGTCCTCGTTCACTGC AAAACTTCTGGGAAGCCATTTTATGCAATTGTTCATAGGGTTACAGGTAGCTTAATCATT GATTTCGAGCCTGTGAAGCCCTATGAAGTACCCATGACTGCTGCAGGGGCCCTGCAGTCG TATAAACTTGCAGCCAAAGCCATTACTCGCTTGCAGGCCTTGCCCAGCGGCAGTATGGAA AGACTTTGTGACACTATGGTTCAGGAGGTTTTCGAACTCACGGGTTATGACAGGGTGATG ACGTATAAGTTTCACGATGATGATCATGGAGAGGTGGTGGCCGAGATCACGAAGCCTGGC CTCGATCCTTACCTTGGTTTACACTATCCTGCTACGGATATCCCACAGGCTGCACGCTTT TTGTTCATGAAGAATAAGGTCCGAATGATTTGTGATTGCCGAGCGAAACATGTGAAGGTA GTCCAAGATGAGAAGCTTCCATTTGATTTAACATTGTGCGGCTCTACCCTTAGGGCTCCT CACTACTGCCATCTACAGTATATGGAGAACATGAGTTCAATTGCATCCCTTGTAATGGCA GTTGTGGTCAATGACGGGGACGAAGAGGGAGAAAGCTCTGATTCGACACAATCTCAAAAG AGAAAAAGGCTTTGGGGCCTGGTGGTTTGCCACAACACCACCCCAAGGTTTGTTCCCTTC CCTCTGAGGTATGCATGTGAATTTCTTGCACAAGTCTTTGCCATACACGTCAACAAGGAA CTGGAATTGGAAAGTCAGATTCTTGAGAAAAATATCCTGCGTACTCAGACTCTCTTGTGT GATATGCTGATGCGAGATGCTCCCTTAGGTATCGTGTCACAGAGTCCCAATATTATGGAT CTTGTCAAATGTGATGCTGCTGCTTTGCTCTATAAGAATAAGATACATCGACTTGGAATG ACCCCAAGCGACTTTCAGCTGCACGATATTGTCTCGTGGCTTTCTGAGTATCATACGGAT TCCACAGGTTTGAGTACAGACAGCATGTATGATGCTGGTTTCCCTGGGGCTCTTGCTCTT GGTGATGCAGTGTGTGGTATGGCAGCTGTTAGAATATCTGATAAGGACTGGCTGTTCTGG TTTAGGTCACACACTGCTGCTGAAGTTAGATGGGGTGGAGCAAAGCATGAACCTGGTGAA AAGGATGATGGCAGGAAAATGCATCCTAGGTCATCATTCAAAGCATTCCTGGAAGTTGTC AAGACTAGGAGTATACCATGGAAGGACTATGAAATGGACGCAATCCATTCTTTGCAGCTT ATACTAAGAAATGCATCCAAGGATGCTGATGCCATGGATTCAAATACCAATACTATCCAC ACGAAGCTTAACGATCTTAAGATTGATGGGTTGCAGGAGCTAGAAGCAGTGACTGCTGAA ATGGTCCGCTTGATTGAAACAGCTTCAGTTCCTATCTTCGCAGTTGATGTTGATGGGCAG CTTAATGGCTGGAACACAAAAATTGCTGAATTAACCGGTCTTCCTGTTGATGAAGCAATT GGGAATCATTTGCTCACACTCGTGGAGGATTCCTCAGTTGATACAGTGAGTAAAATGTTG GAATTAGCATTGCAAGGGAAAGAGGAAAGAAATGTAGAGTTCGAAATAAAAACACATGGG CTGTCAGGAGATTCTAGTCCAATCAGCTTAATTGTGAATGCATGTGCAAGCAGGGATGTT GGAGATAGTGTTGTGGGTGTATGTTTTATTGCTCAGGATATAACAGGACAAAAAAATATT ATGGACAAATTCACCCGGATTGAAGGTGACTATAGAGCTATTATCCAAAATCCTCACCCA TTGATCCCACCAATATTTGGCACTGATCAATTCGGCTGGTGTTCTGAGTGGAACTCGGCA ATGACAAAGTTAACTGGGTGGCGGCGTGATGATGTTATTGATAAAATGCTATTAGGGGAG GTTTTCGGGACACAGGGAGCTTGCTGCCGTTTCAAGAATCAAGAAGCTTTTGTAAATTTT GGAGTTGTACTAAACAATGCTATGACTGGTCAAGAGTGTGAGAAGATATCTTTTGGTTTC TTTGCACGTAATGGGAAATACGTAGAGTGCTTACTTTGTGTGAGCAAAAAGTTGGATAGA GAGGGTGCAGTCACGGGACTGTTTTGTTTCCTGCAGCTTGCAAGCCATGAGCTGCAGCAA GCTCTTCATGTTCAACGATTATCAGAACAAACTGCATTGAAGAGGTTGAAAGTATTAGCT TACATAAGGAGGCAGATTAGGAACCCTCTTTCTGGAATTATATTCTCTCGGAAAATGCTA GAGGGGACTAACTTGGGCGAAGAGCAGAAAAATATACTGCGTACTAGTTCCCAGTGTCAG CGTCAGCTCAACAAAATTCTTGATGATACAGATCTTGATAGCATCATTGATGGTTATTTG GATCTGGAGATGCTCGAGTTCAAGCTGCACGAAGTATTGGTAGCATCTATTAGTCAAATC ATGATGAAGAGCAATGGAAAGAATATAATGATTGTGAATGACATGGTTGAAGATCTTCTC AATGAAACTTTATACGGAGATAGTCCGAGGCTTCAACAGGTCTTAGCTAACTTTTTGTTG GTATCTGTGAATTCTACACCAAGTGGTGGTCAGCTTAGTATTTCAGGCAGGTTAACAAAA GATCGCATAGGAGAATCTGTTCAGCTTGCTCTCTTGGAATTCAGGATAAGCCACACAGGG GGAGGAGTGCCAGAAGAATTGCTAAGCCAAATGTTCGGTACTGAGGCCGAAGCATCTGAA GAAGGAATCAGCTTACTCATCAGCAGAAAGCTGGTCAAGCTGATGAATGGGGAAGTTCAG TACCTAAGAGAGGCCGGGCGATCAACTTTCATTATATCCGTTGAACTTGCAGTGGCTACC AAGTCAAGCTGA

Peptide Sequence

PEP ID	XP_016492674.1
PEP Infomation	PREDICTED: phytochrome A1 [Nicotiana tabacum]
Sequence	MSSSRPSQSSTTSARSKHSARIIAQTTIDAKLHADFEESGDSFDYSSSVRVTSVAGDERK PKSDRVTTAYLNQIQKGKFIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGEL PALGIGTDIRTIFTGPSAAALQKALGFREVSLLNPVLVHCKTSGKPFYAIVHRVTGSLII DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVM TYKFHDDDHGEVVAEITKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKV VQDEKLPFDLTLCGSTLRAPHYCHLQYMENMSSIASLVMAVVVNDGDEEGESSDSTQSQK RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLC DMLMRDAPLGIVSQSPNIMDLVKCDAAALLYKNKIHRLGMTPSDFQLHDIVSWLSEYHTD STGLSTDSMYDAGFPGALALGDAVCGMAAVRISDKDWLFWFRSHTAAEVRWGGAKHEPGE KDDGRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILRNASKDADAMDSNTNTIH TKLNDLKIDGLQELEAVTAEMVRLIETASVPIFAVDVDGQLNGWNTKIAELTGLPVDEAI GNHLLTLVEDSSVDTVSKMLELALQGKEERNVEFEIKTHGLSGDSSPISLIVNACASRDV GDSVVGVCFIAQDITGQKNIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSA MTKLTGWRRDDVIDKMLLGEVFGTQGACCRFKNQEAFVNFGVVLNNAMTGQECEKISFGF FARNGKYVECLLCVSKKLDREGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLA YIRRQIRNPLSGIIFSRKMLEGTNLGEEQKNILRTSSQCQRQLNKILDDTDLDSIIDGYL DLEMLEFKLHEVLVASISQIMMKSNGKNIMIVNDMVEDLLNETLYGDSPRLQQVLANFLL VSVNSTPSGGQLSISGRLTKDRIGESVQLALLEFRISHTGGGVPEELLSQMFGTEAEASE EGISLLISRKLVKLMNGEVQYLREAGRSTFIISVELAVATKSS

Transcript Sequence

Gene sequence data has not been registered.